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Iran Conflict 2026
12JUN

Khamenei orders the uranium to stay

4 min read
09:18UTC

Mojtaba Khamenei reversed Iran's pre-war offer to export half its 60%-enriched stockpile on 21 May, ordering the material to remain inside the country and breaking Trump's private assurance to Netanyahu that any settlement would ship the HEU out.

ConflictDeveloping
Key takeaway

Khamenei's directive converts the 60%-enriched stockpile from negotiable deal asset into permanent sovereignty claim.

Supreme Leader Mojtaba Khamenei, appointed by the Assembly of Experts on 7 March after Israeli strikes killed his father, ordered on Thursday 21 May that Iran's 60%-enriched uranium stockpile must remain inside the country, two senior Iranian sources told Reuters 1. The rationale offered through those sources: exporting the material would leave Iran more vulnerable to future US and Israeli strikes. Before the war, during quiet talks with the Trump administration, Tehran had signalled willingness to ship half of the stockpile out as a confidence-building step . Thursday's directive reverses that offer, and breaks what Israeli officials told Reuters was Donald Trump's private assurance to Benjamin Netanyahu that any settlement would require all of Iran's highly enriched uranium (HEU, uranium enriched above 20% U-235; 60% sits roughly two-thirds of the way to weapons-grade) to leave the country.

The International Atomic Energy Agency (IAEA) estimated 440.9 kg of 60%-enriched material at the time of the June 2025 strikes. The Bulletin of Atomic Scientists put the figure nearer 540 kg at the Isfahan tunnel complex, built from pre-war production rates the IAEA can no longer verify. Former Israeli intelligence officials told Haaretz last weekend that the strike campaign left Iran's nuclear capacity structurally intact . The stockpile survived; the directive now declares it will not move.

An Iranian official denied the order to Al Jazeera's Ali Hashem, calling the Reuters story "propaganda by enemies of the agreement" while conceding that Iran would "independently reduce enrichment levels within the framework" 2. The denial and the directive describe the same operational outcome: the material stays inside Iran. Iranian sources have floated dilution under IAEA supervision as a compromise, but the Majlis voted 221-0 on 11 April to suspend all IAEA cooperation. Any supervised dilution would first require Tehran to reinstate the access its own parliament has just revoked.

The doctrinal lineage matters here. Ali Khamenei's 2003 fatwa against nuclear weapons has been the IRGC's standard public proof for two decades that Iran does not seek the bomb. The 2026 inversion turns the same instrument: vulnerability to repeat strikes, not renunciation of weaponisation, becomes the reason the material stays. The trajectory resembles North Korea's 2009 reactor restart after the Six-Party Talks collapse, when material that had been a negotiating chip became permanent regime property and no subsequent process recovered it.

Deep Analysis

In plain English

Iran has been holding a large stockpile of uranium that has been partially purified; not to bomb-grade, but closer to it than normal reactor fuel. Before the 2025 war began, Iran had quietly suggested it might be willing to send some of that material out of the country as a goodwill gesture. That offer was the centrepiece of any possible deal with the US. On 21 May, Iran's new Supreme Leader, Mojtaba Khamenei, ordered that the uranium stays inside Iran. No exports, no transfers. He cited the US-Israeli strikes as proof that having the material abroad would leave Iran defenceless against future attacks. For a deal to happen, the US and Israel had both privately insisted the uranium had to leave Iranian soil. Khamenei has now ruled that out. An Iranian official tried to soften the announcement by saying Iran would reduce enrichment on its own terms, but the bottom line is the same: the material that was the main bargaining chip in any settlement is now off the table.

Deep Analysis
Root Causes

Mojtaba Khamenei's legitimacy deficit sits behind the directive's timing and force. He lacks the *marja* theological credentials Article 109 of the Iranian constitution requires for the Supreme Leader position. His power base is the IRGC, not the clerical establishment; at least eight Assembly of Experts members boycotted the 7 March appointment citing IRGC pressure.

A Supreme Leader whose institutional authority rests on IRGC backing rather than clerical consensus cannot afford to be seen agreeing to export the one material asset the IRGC treats as its deterrence architecture. The directive is therefore partly a consolidation instrument: Khamenei aligns himself with the IRGC's strategic position to shore up the domestic legitimacy the *marja* deficit denies him.

The June 2025 strike campaign removed the IAEA's verification presence while failing to destroy the stockpile. That combination; no inspectors, surviving material; produces the specific structural condition that makes retention attractive: Iran can assert it holds 540 kg (Bulletin of Atomic Scientists estimate) while the US must price the risk without being able to verify.

The directive capitalises on that asymmetry. Operation Midnight Hammer collapsed the Isfahan tunnel entrances in June 2025 but left the stockpile intact underground; the Bulletin of Atomic Scientists estimated 540 kg survived at that site, and Khamenei's 21 May directive claims that surviving material as untouchable sovereign property.

What could happen next?
  • Consequence

    US-Iran diplomacy loses its central tradeable item. Any settlement framework that required Iranian HEU export; which the Trump administration had privately committed to Netanyahu; must now be rebuilt around domestic dilution or IAEA-supervised downblending, both of which require Iranian access reinstatement the Majlis's 221-0 vote has blocked.

    Short term · Assessed
  • Risk

    Netanyahu's domestic coalition faces a credibility test. Trump's private assurance that HEU would leave Iran was a condition Netanyahu sold to Likud's right flank. If the directive holds, Netanyahu must either publicly accept a weakened settlement or push for resumed strikes; a decision that lands inside a coalition that gave him the mandate on the export condition.

    Short term · Assessed
  • Precedent

    The Khomeini fatwa parallel suggests the directive will be treated as irreversible by subsequent Iranian administrations. If the precedent holds, the HEU export route closes permanently regardless of which government sits in Tehran.

    Long term · Suggested
First Reported In

Update #105 · Khamenei keeps the uranium; House pulls the vote

Reuters· 22 May 2026
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Causes and effects
This Event
Khamenei orders the uranium to stay
The Supreme Leader has converted the most negotiable item in any Iran settlement into a permanent sovereignty claim, removing the physical asset Washington and Tel Aviv had been negotiating to extract.
Different Perspectives
Oil markets and Lloyd's of London
Oil markets and Lloyd's of London
Brent fell to $89.25 on ceasefire probability, not new barrels, with traders voting for Trump's deed over Tehran's denial. Lloyd's has not repriced Hormuz war-risk cover because its trigger requires a UN Security Council resolution or government certification, so tanker insurance costs remain elevated regardless of the spot move.
Pakistan and Qatar mediators
Pakistan and Qatar mediators
Pakistan's Mohsin Naqvi was in Tehran for his second visit in under a week, using the Pakistan-Qatar channel that delivered April's ceasefire after an identical public-denial cycle. The channel carries both civilian and military buy-in from Islamabad, the only configuration Iran's split command cannot dismiss as a partial signal.
India
India
India summoned the US Deputy Chief of Mission after three Indian sailors were killed aboard MT Settebello, the first formal grievance from a major non-belligerent directed at US enforcement. Indian seafarers supply roughly 12 per cent of the global maritime workforce; their presence on third-flag Gulf tankers is structurally inevitable regardless of bilateral diplomacy.
Islamic Revolutionary Guard Corps (IRGC)
Islamic Revolutionary Guard Corps (IRGC)
The IRGC declared Hormuz closed on 11 June while civilian negotiators were on the same mediation channel, then issued no public comment on the MoU framework. Its silence on the framework, rather than any foreign ministry statement, is the operative approval signal; the corps' unilateral Hormuz closure shows it did not treat the diplomatic track as binding on its operations.
Iran foreign ministry (Baghaei)
Iran foreign ministry (Baghaei)
Esmail Baghaei told IRNA that reports of a finalised deal were 'merely speculation' and that Iran had 'not yet made a final decision'. The denial is structurally identical to Iranian foreign ministry statements during the April ceasefire talks, which produced a binding text within 48 hours of the same language.
Trump administration / CENTCOM
Trump administration / CENTCOM
Trump cancelled the third strike day and called the MoU 'very strong' and almost ready to sign, while CENTCOM kept tanker enforcement running in the same 24-hour window. The administration is simultaneously withdrawing the military pressure it claims drove the deal and sustaining the enforcement campaign it is trying to trade away.